BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B02SP1|AL430484
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1377 1814 0.0
>3x_Contig1377
Length = 8397
Score = 1814 bits (914), Expect = 0.0
Identities = 916/918 (99%)
Strand = Plus / Minus
Query: 1 atctggttagattatcgtaaacgttcattactcaggttgccataacttctgttaaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7479 atctggttagattatcgtaaacgttcattactcaggttgccataacttctgttaaacatt 7420
Query: 61 aactcaatactgatttgtcgtgttatgtttaaattcataaatagtagtaaatatatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7419 aactcaatactgatttgtcgtgttatgtttaaattcataaatagtagtaaatatatgata 7360
Query: 121 ttttgtgaaatcgatagcaacggatacatatggcctttttatattggccaacatatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7359 ttttgtgaaatcgatagcaacggatacatatggcctttttatattggccaacatatatgt 7300
Query: 181 taagatataaaagcaatgatggatgctgatggtgatatggaaagaaagaatgaatgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7299 taagatataaaagcaatgatggatgctgatggtgatatggaaagaaagaatgaatgaatg 7240
Query: 241 amacttcggttatttgacgaagtgaatattattctattagaaatgaatgtgaatagtatt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7239 aaacttcggttatttgacgaagtgaatattattctattagaaatgaatgtgaatagtatt 7180
Query: 301 ggtggaatcctcaaaatcacagcagtattttaatgaatccttttaaggtgcgatatagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7179 ggtggaatcctcaaaatcacagcagtattttaatgaatccttttaaggtgcgatatagta 7120
Query: 361 cagcttgaattaacaaacaaggaaatctggaggaaaatgcagcctactgatgagagtgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7119 cagcttgaattaacaaacaaggaaatctggaggaaaatgcagcctactgatgagagtgta 7060
Query: 421 ttccattgaataacggataaattcgcagagaaataaatcccttatttatttaacgccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7059 ttccattgaataacggataaattcgcagagaaataaatcccttatttatttaacgccatt 7000
Query: 481 ctttttagtcgtggagttgcgtattgccttgcgttgtatgcagaactgttatcaggctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6999 ctttttagtcgtggagttgcgtattgccttgcgttgtatgcagaactgttatcaggctca 6940
Query: 541 ggagtttggaaatcagaagaataactgcagtcgctctcagaaaatggagttgatgctata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6939 ggagtttggaaatcagaagaataactgcagtcgctctcagaaaatggagttgatgctata 6880
Query: 601 gattccattgcatcattagcagcatctgaatatggtttatttccgaaagatatatctcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6879 gattccattgcatcattagcagcatctgaatatggtttatttccgaaagatatatctcca 6820
Query: 661 tcttctgcctcatcctcctcaaactgctcgcgtctttttgtcgcaaagtttgttatttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6819 tcttctgcctcatcctcctcaaactgctcgcgtctttttgtcgcaaagtttgttatttca 6760
Query: 721 gtcgaagagccgttggttgaccccggcctccacgtcagttctttggatttaacacgctca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6759 gtcgaagagccgttggttgaccccggcctccacgtcagttctttggatttaacacgctca 6700
Query: 781 tggtaagccacgagaccgctacaccagtwaatgttatcctctttcatattgttaacggta 840
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6699 tggtaagccacgagaccgctacaccagtaaatgttatcctctttcatattgttaacggta 6640
Query: 841 ggtctcaagtttttaacgtaactaaaagcatccacaacattgatagatgggttctgtttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6639 ggtctcaagtttttaacgtaactaaaagcatccacaacattgatagatgggttctgtttg 6580
Query: 901 agcatatgactgatcaaa 918
||||||||||||||||||
Sbjct: 6579 agcatatgactgatcaaa 6562
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7061
Number of Sequences: 1807
Number of extensions: 7061
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)